Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789805.1_cds_XP_016498480.1_1176
CDS Infomation

[gene=LOC107817203] [db_xref=GeneID:107817203] [protein=phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016498480.1] [location=join(67151..67654,68595..68872,69374..69650,70303..70548,70638..>70709)] [gbkey=CDS]
Sequence

ATGGCTTTATCAAACACCTTATCATTGTCATCATCAAAATCCCTTGTTCAATCTCACCTT
CTCCACAATCCCTCCTTACCCCAGCCTCGTATTCCCGTTTTTCACAACCCCCAACATGGG
CGGCGCCACCCCATCTCCGCCGTACACGCGGCGGAGCCCGCCAAAACAGCAACTGCTTCA
CAGCCGTTGAAAAAAACCCAATGGAGTCTTGATTCTTGGAAAAGCAAAAAGGCTTTGCAA
TTACCTGAATACCCAGATGAAAAAGAACTTGAATCTGTGCTTGAAACTCTTGAATCTAAT
CCTCCACTTGTGTTTGCTGGTGAAGCTAGGAATTTAGAAGAGAGACTTGGTGAAGCTGCT
TTAGGAAAAGCTTTTTTATTACAAGGTGGTGATTGTGCTGAGAGTTTTAAGGAATTTAAT
GCTAATAATATTCGTGATACTTTTAGGATTCTTCTTCAGATGAGTGTTGTTCTTATGTTT
GGTGGTCAAGTTCCTGTGATTAAGGTTGGAAGAATGGCGGGTCAGTTTGCGAAACCAAGA
TCAGATCCGTTTGAGGAGATTGATGGAGTGAAGCTGCCAAGTTACAAGGGTGATAACATT
AATGGCGATACATTTGATGAGAAGTCAAGAATTCCAGACCCTCATAGGCTTATTAGGGCT
TACATGCAATCTGCTGCGACTCTTAACCTTCTTAGGGCTTTTGCTACTGGAGGTTATGCT
GCAATGCAGAGGGTCACCGAATGGAATCTTGATTTTGTGGAGAACAGTGAGCAAGGAGAT
AGGTATCAAGAACTAGCTCACAGAGTCGATGAAGCCTTGGGATTCATGGCTGCTGCTGGA
CTCACAGTAGACCACCCTATCATGGCAACAACTGATTTTTGGACATCTCACGAGTGCTTG
CTTCTTCCTTATGAACAAGCACTTACAAGGGAGGATTCAACTTCTGGTCTTTTCTATGAT
TGTTCCGCTCACATGATTTGGGTTGGGGAACGAACCAGGCAACTTGACGGTGCTCATGTT
GAGTTCTTGAGAGGAGTAGCAAACCCACTTGGCATAAAGGTGAGCCAAAAGATGGATCCA
AATGAGCTCGTTAAACTCATTGACATCCTGAACCCAACCAATAAGCCCGGAAGAATTACT
GTAATTGTGAGAATGGGTGCTGAGAATATGAGAGTGAAGCTTTGCCACTTGATCAGGGCA
GTTCGAGGAGCTGGACAGATTGTTACCTGGGTTTGTGACCCGATGCACGGCAACACCATA
AAGGCACCATGCGGACTCAAAACCCGTGCTTTCGATTCAATCCTGGCTGAGGTCCGAGCT
TTCTTCGATGTGCATGAGCAAGAAGGGAGCCACCCTGGTGGTATCCATCTAGAAATG

Peptide Sequence

PEP ID

XP_016498480.1
PEP Infomation

PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MALSNTLSLSSSKSLVQSHLLHNPSLPQPRIPVFHNPQHGRRHPISAVHAAEPAKTATAS
QPLKKTQWSLDSWKSKKALQLPEYPDEKELESVLETLESNPPLVFAGEARNLEERLGEAA
LGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPR
SDPFEEIDGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYA
AMQRVTEWNLDFVENSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMATTDFWTSHECL
LLPYEQALTREDSTSGLFYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDP
NELVKLIDILNPTNKPGRITVIVRMGAENMRVKLCHLIRAVRGAGQIVTWVCDPMHGNTI
KAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTYDDLG
SRYHTHCDPRLNASQSLELSFIVAERLRKRRMASQRL

Transcript Sequence

Gene sequence data has not been registered.